cuspuk/snakemake
Run Snakemake on the repository
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Inputs
| name | description | required | default |
|---|---|---|---|
| directory | Working directory for the execution | yes | .test |
| snakefile | Snakefile containing the workflow description | — | Snakefile |
| args | Additional Snakemake arguments to use | no | "" |
| stagein | Additional steps to prepare the workflow for execution | no | "" |
| task | Whether to run Snakemake or to generate a container image specification. | no | run |
| show-disk-usage-on-error | — | no | false |
Outputs
no outputs