genometric/Cromwell Automation TEST0011
Automates the submission and monitoring of WDL workflows to a Cromwell server.
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Inputs
| name | description | required | default |
|---|---|---|---|
| subcommand | Specifies the task that the action should perform, and its value can be either of the following. | no | synchronous |
| azure_storage_account_name | Sets the storage account name used by the Cromwell on Azure instance. | yes | — |
| azure_storage_container_name | Sets the Azure container name under the given storage account that Cromwell on Azure instance uses. | yes | — |
| azure_storage_inputs_container_name | Sets the Azure container name that will be used to store the files used for submitting a workflow to Cromwell on Azure. | yes | — |
| azure_storage_blob_name | Sets the name of the blob under the set `azure_storage_account_name/azure_storage_container_name` that Cromwell on Azure listens for new submissions. | no | new |
| azure_storage_metadata_container_name | Sets the container name that contains the metadata of the completed tasks. | no | outputs |
| workflow_path | Sets the local path of the workflow to be tested. | yes | — |
| workflow_inputs_path | Sets the local path of a file in `JSON` format that contains the inputs of the workflow to be tested. | yes | — |
| workflow_options_path | Sets the local path to a file in `JSON` format that contains the Cromwell options for running the workflow. | no | — |
| workflow_dependencies_path | Sets the local path to a file in `ZIP` format that contains all the dependencies of the workflow to be tested. | yes | — |
| workflow_id | Sets the UUID of the workflow. This option is used when `subcommand = monitor` or `subcommand = metadata`. | no | — |
Outputs
no outputs